publications
2011
- Monteoliva L, Martinez-Lopez R, Pitarch A, Hernaez ML, Serna A, Nombela C, Albar JP, Gil C.Quantitative proteome and acidic subproteome profiling of Candida albicans yeast-to-hypha transition. J Proteome Res. 2011 Feb 4;10(2):502-17. Epub 2010 Dec 31

2010
- Pitarch A, Nombela C, Gil C.Prediction of the clinical outcome in invasive candidiasis patients based on molecular fingerprints of five anti-Candida antibodies in serum Mol Cell Proteomics. 2011 Jan;10(1):M110.004010. Epub 2010 Sep 21.

2009
- Cabezón V, Llama-Palacios, A, Nombela C, Monteoliva L, Gil C Analysis of Candida albicans plasma membrane proteome Proteomics. 2009 Oct 12; 9(20):4770-4786

- Vialás Fernández V, Nogales-Cadenas R, Nombela C, Pascual-Montano A, Gil C Proteopathogen, A protein database for studying Candida albicans - Host interaction Proteomics. 2009 Sep 9; 9(20):4664-4668.

- Prados-Rosales R, Luque-Garia JL, Martínez-López R, Gil C, Di Pietro A The Fusarium oxysporum cell wall proteome under adhesion-inducing conditions Proteomics. 2009 Aug 17; 9(20):4755-4769.

- Martínez-Solano L, Reales-Calderón JA, Nombela C, Molero G, Gil C Proteomics of RAW 264.7 macrophages upon interaction with heat-inactivated Candida albicans cells unravel an anti-inflammatory response Proteomics. 2009 Jun; 9(11): 2995-3010

- Martínez-Gomariz, M., Perumal, P., Mekala, S., Nombela, C., Chaffin, W.L., Gil, C. Proteomic analysis of
cytoplasmic and surface proteins from yeast cells, hyphae and biofilms of Candida albicans Proteomics. 2009 Apr; 9(8):2230-52

- Pitarch A, Nombela C and Gil C Identification of the Candida albicans Immunome expressed during systemic
infection by Mass Spectrometry Humana Press Inc. Host-Pathogen Interactions. S.Rupp. (Ed). The Humana Press Inc.
New Jersey, USA. Methods Mol Biol. 470: 187-235. 2009
- Pitarch A, Nombela C and Gil C Proteomic profiling of serological response to Candida albicans during
Host-Commensal and Host-Pathogen interactions Humana Press Inc.
Host-Pathogen Interactions. S.Rupp. (Ed). The Humana Press Inc.
New Jersey, USA. Methods Mol Biol. 470: 369-411. 2009
2008
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Dunn MJ, Gil C, Kleinhammer F, Lottspeich et al. EuPA achieves visibility. An activity report on the first three years Journal of Proteomics 2008 71, 11-18

- Martínez-Lopez R, Nombela C, Díez-Orejas R, Monteoliva L, Gil C Immunoproteomic analysis of the protective response obtained from vaccination with Candida albicans ecm33 cell wall mutant in mice Proteomics. 2008 Jul; 8(13): 2651-64

- Pitarch A, Jimenez A, Nombela C, Gil C Serological proteome analysis to identify systemic candidiasis patients in the intensive care unit: Analytical, diagnostic and prognostic validation of anti-Candida enolase antibodies on quantitative clinical platforms Proteomics Clinical Applications. 2008 2, 596-618
- Pitarch A, Nombela C, Gil C The Candida Immunome as a mine for clinical biomarker development for systemic candidiasis: From biomarker discovery to Assay validation
Pathogenic Fungi: Insights in Molecular Biology. Gioconda San-Blas and Richard Calderone (Eds), Caister Academic Press, UK. 2008
- Pitarch A, Nombela C, Gil C Collection of proteins secreted from yeast protoplasts in active cell wall regeneration Methods Mol Biol. 2008 425:241:63

- Pitarch A, Nombela C, Gil C Cell wall fractionation for yeast and fungal proteomics Methods Mol Biol. 2008 425:217:39

- Espada R, Valdespina S, Dea MA, Molero G, Ballesteros MP, Bolas F, Torrado JJ In vivo distribution and therapeutic efficacy of a novel amphotericin B poly-aggregated formulation J Antimicrob Chemother. 2008. May; 61(5):1125:31

2007
- Albar JP, Corthals GL, Gil C, James P, Jensen ON, Palagi PM, Penque D Promoting Proteomics knowledge in Europe. Report on the activities of the EuPA Education Comitee Practical Proteomics. 2007 1, 90-94

- Pitarch A, Nombela C, Gil C Reliability of antibodies to Candida methionine synthase for diagnosis, prognosis and risk stratification in systemic candidiasis: a generic strategy for the prototype development phase of proteomic markers Proteomics Clinical Applications. 2007 1, 1221-1242
- Morín M, Monteoliva L, Insenser M, Gil C, Dominguez A Proteomic analysis reveals metabolic changes during yeast to hypha transition in Yarrowia lipolytica Journal of Mass Spectrometry 2007 43, 1453-1462

- Alvarez-Garcia G, Pitarch A, Zaballos A, Fernandez-Garcia A, Gil C, Gomez-Bautista M, Aguado-Martinez A, Ortega Mora LMThe NcGRA7 gene encodes the immunodominant 17 kDa antigen of Neospora caninum Parasitology 11, 1-10. 2007

- Fernández-Arenas E, Cabezón V, Bermejo C, Arroyo J, Nombela C, Díez-Orejas R, Gil C Integrated genomic and proteomic strategies bring new insight into Candida albicans response upon macrophage interaction Molecular and Cellular Proteomics. 2007 6(3):460-78

- Pitarch A, Molero G, Monteoliva L, Thomas DP, Lopez-Ribot JL, Nombela C, Gil CProteomics in Candida species "Candida: comparative and functional genomics". d'Enfert C, and Hube B (Eds). Horizon Scientific Press. 2007
2006
- Thomas DP, Pitarch A, Monteoliva L, Gil C Lopez-Ribot JL Proteomics to study Candida albicans biology and pathogenicityInfectious Disorders. Drug Targets 6:335-41. 2006

- James P, Corthals G, Gil C Report. Proteomics Education, an important challenge for the Scientific Community: Report on the Activities of the EuPA Education Committee Proteomics. 9; 6(S2):77-81. 2006.

- Chagoyen M, Carmona-Saez P, Gil C, Carazo JM, Pascual-Montano A A literature-based similarity metric for biological processes BMC Bioinformatics 7, 363. 2006.

- Martinez-Solano L, Nombela C, Molero G, Gil C Differential protein expression of murine macrophages upon interaction with Candida albicans Proteomics 6: S133-144. 2006

- Lopez-Villar E, Monteoliva L, Larsen MR, Sachon E, Shabaz M, Pardo M, Pla J, Gil C, Roepstroff P, Nombela C Genetic and Proteomic evidences support the localization of yeast enolase in the cell surface Proteomics 6: S107-118. 2006

- Martinez-Lopez R, Park H, Myers CL, Gil C, Filler SG Candida albicans Ecm33p is important for normal cell wall architecture and interaction with host cells Eukaryotic Cell. 5 (1), 140-147. 2006

- Pitarch A, Jimenez A, Nombela C, Gil C Decoding serological response to Candida cell wall immunome into novel diagnostic, prognostic and therapeutic candidates for systemic candidiasis by proteomic and bioinformatic analysis Mol Cell Proteomics 5 (1), 79-96. 2006

- Zuzuarregui A, Monteoliva L, Gil C, del Olmo M Transcriptomic and Proteomic Approach for understanding the molecular basis of adaptation of Saccharomyces cerevisiae to wine fermentation Applied and Environmental Microbiology 72 (1), 836-847. 2006

- Nombela C, Gil C, Chaffin WL Non-conventional protein secretion in yeast
Trends Microbiol.14 (1), 15-21. 2006

- Lopez-Ribot JL, Diez-Orejas R, Gil C Antibodies Immunity against Fungal Pathogens. Brown and Netea (Eds.) Springer Verlag. 2006
- Pitarch A, Nombela C, Gil C Contribution of proteomics to diagnosis, treatment, and prevention of candidiasis "Microbial proteomics: Functional biology of whole organisms". Humphrey-Smith I, and Hecker M (Eds.). Wiley CH. 2006
Methods Biochem Anal. 2006; 49: 331-61. Review
- Pitarch A, Nombela C, Gil C Candida albicans biology and pathogenicity: insights from proteomics "Microbial proteomics: Functional biology of whole organisms". Humphrey-Smith I, and Hecker M (Eds.). Wiley CH. 2006
Methods Biochem Anal. 2006; 49: 285-330. Review